Protein contact prediction by using information theory

Citations

WEB OF SCIENCE

2
Citations

SCOPUS

3

초록

We develop a novel method for predicting the inter-residue contacts of a protein from evolutionary information obtained from the alignment of multiple sequences. Our method is based on information theory, where we use conditional mutual information so that the spurious correlations coming from indirect effects are removed. The benchmark test shows better performance than the previous method using mutual information does, suggesting the potential of the new method.

키워드

Protein structure prediction; Contact prediction; MULTIPLE SEQUENCE ALIGNMENTS; MUTUAL INFORMATION; RESIDUE CONTACTS; FAMILIES; COVARIANCE
제목
Protein contact prediction by using information theory
저자
Byeon, Jae-Young; Lee, Julian
DOI
10.3938/jkps.70.876
발행일
2017-05
유형
Article
저널명
Journal of the Korean Physical Society
권
70
호
9
페이지
876 ~ 879