Minke whale genome and aquatic adaptation in cetaceans

  • Yim, Hyung-Soon
  • Cho, Yun Sung
  • Guang, Xuanmin
  • Kang, Sung Gyun
  • Jeong, Jae-Yeon
  • ... Kim, Sangsoo
  • 외 49명
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초록

The shift from terrestrial to aquatic life by whales was a substantial evolutionary event. Here we report the whole-genome sequencing and de novo assembly of the minke whale genome, as well as the whole-genome sequences of three minke whales, a fin whale, a bottlenose dolphin and a finless porpoise. Our comparative genomic analysis identified an expansion in the whale lineage of gene families associated with stress-responsive proteins and anaerobic metabolism, whereas gene families related to body hair and sensory receptors were contracted. Our analysis also identified whale-specific mutations in genes encoding antioxidants and enzymes controlling blood pressure and salt concentration. Overall the whale-genome sequences exhibited distinct features that are associated with the physiological and morphological changes needed for life in an aquatic environment, marked by resistance to physiological stresses caused by a lack of oxygen, increased amounts of reactive oxygen species and high salt levels.

키워드

RNA-SEQMAXIMUM-LIKELIHOODTURSIOPS-TRUNCATUSPROTEIN FAMILIESDATABASESEQUENCESALIGNMENTGENESIDENTIFICATIONSTRESS
제목
Minke whale genome and aquatic adaptation in cetaceans
저자
Yim, Hyung-SoonCho, Yun SungGuang, XuanminKang, Sung GyunJeong, Jae-YeonCha, Sun-ShinOh, Hyun-MyungLee, Jae-HakYang, Eun ChanKwon, Kae KyoungKim, Yun JaeKim, Tae WanKim, WonduckJeon, Jeong HoKim, Sang-JinChoi, Dong HanJho, SungwoongKim, Hak-MinKo, JunsuKim, HyunminShin, Young-AhJung, Hyun-JuZheng, YuanWang, ZhuoChen, YanChen, MingJiang, AweiLi, ErliZhang, ShuHou, HaolongKim, Tae HyungYu, LiliLiu, ShaAhn, KungCooper, JessePark, Sin-GiHong, Chang PyoJin, WookKim, Heui-SooPark, ChankyuLee, KyooyeolChun, SungMorin, Phillip A.O'Brien, Stephen J.Lee, HangKimura, JumpeiMoon, Dae YeonManica, AndreaEdwards, JeremyKim, Byung ChulKim, SangsooWang, JunBhak, JongLee, Hyun SookLee, Jung-Hyun
DOI
10.1038/ng.2835
발행일
2014-01
유형
Article
저널명
Nature Genetics
46
1
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